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<article article-type="research-article" dtd-version="1.3" xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xml:lang="ru"><front><journal-meta><journal-id journal-id-type="publisher-id">zhros</journal-id><journal-title-group><journal-title xml:lang="ru">Зерновое хозяйство России</journal-title><trans-title-group xml:lang="en"><trans-title>Grain Economy of Russia</trans-title></trans-title-group></journal-title-group><issn pub-type="ppub">2079-8725</issn><issn pub-type="epub">2079-8733</issn><publisher><publisher-name>Федеральное государственное бюджетное научное учреждение "Аграрный научный центр "Донской»</publisher-name></publisher></journal-meta><article-meta><article-id custom-type="elpub" pub-id-type="custom">zhros-7</article-id><article-categories><subj-group subj-group-type="heading"><subject>Research Article</subject></subj-group><subj-group subj-group-type="section-heading" xml:lang="ru"><subject>РАСТЕНИЕВОДСТВО И СЕЛЕКЦИЯ</subject></subj-group><subj-group subj-group-type="section-heading" xml:lang="en"><subject>PLANT-GROWING AND PLANT-BREEDING</subject></subj-group></article-categories><title-group><article-title>Маркерная селекция солеустойчивых форм риса</article-title><trans-title-group xml:lang="en"><trans-title>The marker-assisted breeding of salinity tolerant forms of rice</trans-title></trans-title-group></title-group><contrib-group><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Азарин</surname><given-names>К. В.</given-names></name><name name-style="western" xml:lang="en"><surname>Azarin</surname><given-names>K. V.</given-names></name></name-alternatives><email xlink:type="simple">noemail@neicon.ru</email><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Усатов</surname><given-names>А. В.</given-names></name><name name-style="western" xml:lang="en"><surname>Usatov</surname><given-names>A. V.</given-names></name></name-alternatives><email xlink:type="simple">noemail@neicon.ru</email><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Макаренко</surname><given-names>М. С.</given-names></name><name name-style="western" xml:lang="en"><surname>Makarenko</surname><given-names>M. S.</given-names></name></name-alternatives><email xlink:type="simple">noemail@neicon.ru</email><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Хачумов</surname><given-names>В. А.</given-names></name><name name-style="western" xml:lang="en"><surname>Khachumov</surname><given-names>V. A.</given-names></name></name-alternatives><email xlink:type="simple">noemail@neicon.ru</email><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Костылев</surname><given-names>П. И.</given-names></name><name name-style="western" xml:lang="en"><surname>Kostylev</surname><given-names>P. I.</given-names></name></name-alternatives><email xlink:type="simple">noemail@neicon.ru</email><xref ref-type="aff" rid="aff-2"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Кудашкина</surname><given-names>Е. Б.</given-names></name><name name-style="western" xml:lang="en"><surname>Kudashkina</surname><given-names>E. B.</given-names></name></name-alternatives><email xlink:type="simple">noemail@neicon.ru</email><xref ref-type="aff" rid="aff-3"/></contrib></contrib-group><aff xml:lang="ru" id="aff-1"><institution>Академия биологии и биотехнологии, Южный федеральный университет</institution><country>Russian Federation</country></aff><aff xml:lang="ru" id="aff-2"><institution>ФБГНУ Всероссийский научно-исследовательский институт зерновых культур им. И.Г. Калиненко</institution><country>Russian Federation</country></aff><aff xml:lang="ru" id="aff-3"><institution>Азово-Черноморский инженерный институт ФГБОУ ВО Донской ГАУ</institution><country>Russian Federation</country></aff><pub-date pub-type="collection"><year>2016</year></pub-date><pub-date pub-type="epub"><day>29</day><month>05</month><year>2018</year></pub-date><volume>48</volume><issue>6</issue><fpage>28</fpage><lpage>32</lpage><permissions><copyright-statement>Copyright &amp;#x00A9; Азарин К.В., Усатов А.В., Макаренко М.С., Хачумов В.А., Костылев П.И., Кудашкина Е.Б., 2018</copyright-statement><copyright-year>2018</copyright-year><copyright-holder xml:lang="ru">Азарин К.В., Усатов А.В., Макаренко М.С., Хачумов В.А., Костылев П.И., Кудашкина Е.Б.</copyright-holder><copyright-holder xml:lang="en">Azarin K.V., Usatov A.V., Makarenko M.S., Khachumov V.A., Kostylev P.I., Kudashkina E.B.</copyright-holder><license xml:lang="ru" license-type="creative-commons-attribution" xlink:href="https://creativecommons.org/licenses/by/4.0/" xlink:type="simple"><license-p>Данная работа распространяется под лицензией Creative Commons Attribution 4.0.</license-p></license><license xml:lang="en" license-type="creative-commons-attribution" xlink:href="https://creativecommons.org/licenses/by/4.0/" xlink:type="simple"><license-p>This work is licensed under a Creative Commons Attribution 4.0 License.</license-p></license></permissions><self-uri xlink:href="https://www.zhros.online/jour/article/view/7">https://www.zhros.online/jour/article/view/7</self-uri><abstract><p>Настоящая работа посвящена исследованию ДНК- маркеров для получения солеустойчивого риса на основе сортов Российской селекции. С целью валидации информационной ценности разрабатываемой маркерной системы и получения новых солеустойчивых форм была проведена гибридизация чувствительного к соли отечественного сорта Новатор с линиями IR 52713-2B-8-2B-1-2, IR 74099-3R-3-3, IR 61920-3B-22-2-1 (NSIC Rc 106) - донорами локуса солеустойчивости SalTol QTL. Оценку образцов к солевому стрессу проводили при концентрации NaCl 1,0 %. Растения выращивали в климатической камере при температуре 26ºС, влажности 70 %, световом цикле 14/10 ч. Через 14 дней измеряли длину корешков и проростков, рассчитывали процент всхожести семян. В SSR анализе использовали (RM 140, RM 237, RM 8094, RM 8095, RM 3412, RM 7075, RM 8046, AUT 10777, RM 3412 b, RM 10746, RM 10782, RM 493, RM 10776, RM 10793), ассоциированных с локусом солеустойчивости SalTol . Показано, что кодоминантные маркеры RM 493 и RM 7075 обладают высокой эффективностью при контроле передачи SalTol QTL в отечественные сорта риса. Из растений второго поколения были отобраны 90 образцов, которые проанализировали методом ПЦР на наличие интродуцируемых аллелей SalTol. По результатам ДНК-анализа гибридов F2, полученных на основе высокопродуктивного раннеспелого сорта Новатор и линий-доноров SalTol : IR 52713-2B-8-2B-1-2, IR 74099-3R-3-3, IR 61920-3B-22-2-1 (NSIC Rc 106), были идентифицированы 17 солеустойчивых образцов, гомозиготных по искомому локусу, 29 образцов несли SalTol в гетерозиготном состоянии, у остальных исследованных растений показаны только аллели, унаследованные от сорта Новатор.</p></abstract><trans-abstract xml:lang="en"><p>The work deals with the study of DNA-markers for obtaining salinity tolerant rice on the basis of varieties of Russian breeding. In order to validate the informational value of the developed marker system and to obtain new salinity tolerant forms there has been carried out a hybridization of salt sensitive domestic variety ‘Novator’ with the lines ‘IR 52713-2B-8-2B-1-2’, ‘IR 74099-3R-3-3’, ‘IR 61920-3B-22-2-1 (NSIC Rc 106)’ as the donors of the locus of salinity tolerance SalTol QTL. The samples salinity response was assessed with 1.0% of NaCl concentrate. The plants were grown in the climatic chamber with the temperature of 26ºС, 70% of humidity and light cycle of 14/10 hours. In 14 days the length of the roots and sprouts and the per cent of seed germination were calculated. The markers ‘RM 140’, ‘RM 237’, ‘RM 8094’, ‘RM 8095’, ‘RM 3412’, ‘RM 7075’, ‘RM 8046’, ‘AUT 10777’, ‘RM 3412 b’, ‘RM 10746’, ‘RM 10782’, ‘RM 493’, ‘RM 10776’, ‘RM 10793’ with the locus of salinity tolerance SalTol were used in the SSR-analysis. It has been shown that the co-dominant markers ‘RM 493’ and ‘RM 7075’ possess high efficiency during the introduction of the locus SalTol QTL into the domestic varieties of rice. 90 samples have been selected from the plants of the second generation, which were analyzed on the presence of the introduced alleles SalTol with the PCR-method. The DNA-analysis of the hybrids F2, obtained from the hybridization of the highly productive early-maturing variety ‘Novator’ and the lines-donors of SalTol ‘IR 52713-2B-8-2B-1-2’, ‘IR 74099-3R-3-3’, ‘IR 61920-3B-22-2-1 (NSIC Rc 106)’ determined that 17 samples were salinity tolerant in homozygous state, 29 samples had the allele SalTol in heterozygous state and the rest of the studied plants had only the alleles inherited from the variety ‘Novator’.</p></trans-abstract><kwd-group xml:lang="ru"><kwd>рис</kwd><kwd>сорт</kwd><kwd>солеустойчивость</kwd><kwd>ДНК-маркеры</kwd><kwd>SSR анализ</kwd><kwd>локус SalTol</kwd><kwd>rice</kwd><kwd>variety</kwd><kwd>salinity tolerance</kwd><kwd>DNA-markers</kwd><kwd>SSR-analysis</kwd><kwd>locus SalTol</kwd></kwd-group></article-meta></front><back><ref-list><title>References</title><ref id="cit1"><label>1</label><citation-alternatives><mixed-citation xml:lang="ru">Ashraf, M. Marker-assisted selection in plant breeding for salinity tolerance / Ashraf, M., N.A. Akram, Mehboob-Ur-Rahman and M.R. Foolad // Methods Mol Bio., 2012. - 913. - P. 305-33.</mixed-citation><mixed-citation xml:lang="en">Ashraf, M. Marker-assisted selection in plant breeding for salinity tolerance / Ashraf, M., N.A. Akram, Mehboob-Ur-Rahman and M.R. Foolad // Methods Mol Bio., 2012. - 913. - P. 305-33.</mixed-citation></citation-alternatives></ref><ref id="cit2"><label>2</label><citation-alternatives><mixed-citation xml:lang="ru">Das, P. Understanding salinity responses and adopting “omics-based” approaches to generate salinity tolerant cultivars of rice / Das, P., K.K. Nutan, S.L. Singla-Pareek and A. Pareek // Frontiers in Plant Science, 2015. - 6. - P. 712.</mixed-citation><mixed-citation xml:lang="en">Das, P. Understanding salinity responses and adopting “omics-based” approaches to generate salinity tolerant cultivars of rice / Das, P., K.K. Nutan, S.L. Singla-Pareek and A. Pareek // Frontiers in Plant Science, 2015. - 6. - P. 712.</mixed-citation></citation-alternatives></ref><ref id="cit3"><label>3</label><citation-alternatives><mixed-citation xml:lang="ru">Усатов А.В. ДНК-маркеры устойчивости к ложной мучнистой росе (Plasmopara halstedii) у дикорастущих форм подсолнечника / Усатов А.В., Азарин К.В., Тихобаева В.Е., Воличенко М.И., Гаврилова В.А., Маркин Н.В // Современные проблемы науки и образования, 2013. - № 4. - C. 1-6.</mixed-citation><mixed-citation xml:lang="en">Усатов А.В. ДНК-маркеры устойчивости к ложной мучнистой росе (Plasmopara halstedii) у дикорастущих форм подсолнечника / Усатов А.В., Азарин К.В., Тихобаева В.Е., Воличенко М.И., Гаврилова В.А., Маркин Н.В // Современные проблемы науки и образования, 2013. - № 4. - C. 1-6.</mixed-citation></citation-alternatives></ref><ref id="cit4"><label>4</label><citation-alternatives><mixed-citation xml:lang="ru">Negrão, S. Recent updates on salinity stress in rice: from physiological to molecular responses / Negrão, S., Courtois B, Ahmadi N, Abreu I, Saibo N, Oliveira MM // Critical Reviews in Plant Sciences, 2011. - V. 30. - P. 329-377.</mixed-citation><mixed-citation xml:lang="en">Negrão, S. Recent updates on salinity stress in rice: from physiological to molecular responses / Negrão, S., Courtois B, Ahmadi N, Abreu I, Saibo N, Oliveira MM // Critical Reviews in Plant Sciences, 2011. - V. 30. - P. 329-377.</mixed-citation></citation-alternatives></ref><ref id="cit5"><label>5</label><citation-alternatives><mixed-citation xml:lang="ru">Mekawy, A.M. Growth, physiological adaptation, and gene expression analysis of two Egyptian rice cultivars under salt stress / Mekawy, A.M., D.V. Assaha, H. Yahagi, Y. Tada, A. Ueda and H. Saneoka // Plant Physiology and Biochemistry, 2011. - 1 87. - P. 17-25.</mixed-citation><mixed-citation xml:lang="en">Mekawy, A.M. Growth, physiological adaptation, and gene expression analysis of two Egyptian rice cultivars under salt stress / Mekawy, A.M., D.V. Assaha, H. Yahagi, Y. Tada, A. Ueda and H. Saneoka // Plant Physiology and Biochemistry, 2011. - 1 87. - P. 17-25.</mixed-citation></citation-alternatives></ref><ref id="cit6"><label>6</label><citation-alternatives><mixed-citation xml:lang="ru">Azarin, K. V. Effects of Salt Stress on Ion Balance at Vegetative Stage in Rice (Oryza sativa L.) / K. V. Azarin, A. V. Alabushev, A. V. Usatov, P. I. Kostylev, N.S. Kolokolova and O. A. Usatova // OnLine Journal of Biological Sciences, 2016. - V. 16 (1). - P. 76-81.</mixed-citation><mixed-citation xml:lang="en">Azarin, K. V. Effects of Salt Stress on Ion Balance at Vegetative Stage in Rice (Oryza sativa L.) / K. V. Azarin, A. V. Alabushev, A. V. Usatov, P. I. Kostylev, N.S. Kolokolova and O. A. Usatova // OnLine Journal of Biological Sciences, 2016. - V. 16 (1). - P. 76-81.</mixed-citation></citation-alternatives></ref><ref id="cit7"><label>7</label><citation-alternatives><mixed-citation xml:lang="ru">Bonilla, P. RFLP and SSLP mapping of salinity tolerance genes in chromosome 1 of rice (Oryza sativa L.) using recombinant inbred lines / Bonilla, P., Dvorak J., Mackill D., Deal K., Gregorio G. // The Philippine Agricultural Scientist, 2002. - V. 85. - P. 68-76.</mixed-citation><mixed-citation xml:lang="en">Bonilla, P. RFLP and SSLP mapping of salinity tolerance genes in chromosome 1 of rice (Oryza sativa L.) using recombinant inbred lines / Bonilla, P., Dvorak J., Mackill D., Deal K., Gregorio G. // The Philippine Agricultural Scientist, 2002. - V. 85. - P. 68-76.</mixed-citation></citation-alternatives></ref><ref id="cit8"><label>8</label><citation-alternatives><mixed-citation xml:lang="ru">Lin, H.X. QTLs for Na+ and K+ uptake of the shoots and roots controlling rice salt tolerance / Lin, H.X., Zhu M.Z., Yano M., Gao J.P., Liang Z.W., Su W.A., Hu X.H., Ren Z.H., Chao D.Y. // Theor Appl Genet., 2004. - V. 108(2). - P. 253-260.</mixed-citation><mixed-citation xml:lang="en">Lin, H.X. QTLs for Na+ and K+ uptake of the shoots and roots controlling rice salt tolerance / Lin, H.X., Zhu M.Z., Yano M., Gao J.P., Liang Z.W., Su W.A., Hu X.H., Ren Z.H., Chao D.Y. // Theor Appl Genet., 2004. - V. 108(2). - P. 253-260.</mixed-citation></citation-alternatives></ref><ref id="cit9"><label>9</label><citation-alternatives><mixed-citation xml:lang="ru">Cotsaftis, O. A Two-Staged Model of Na+ Exclusion in Rice Explained by 3D Modeling of HKT Transporters and Alternative Splicing / Cotsaftis, O., D. Plett, N. Shirley, M. Tester and M. Hrmova // PLoS ONE, 2012. - 7(7): e39865.</mixed-citation><mixed-citation xml:lang="en">Cotsaftis, O. A Two-Staged Model of Na+ Exclusion in Rice Explained by 3D Modeling of HKT Transporters and Alternative Splicing / Cotsaftis, O., D. Plett, N. Shirley, M. Tester and M. Hrmova // PLoS ONE, 2012. - 7(7): e39865.</mixed-citation></citation-alternatives></ref><ref id="cit10"><label>10</label><citation-alternatives><mixed-citation xml:lang="ru">Kumar, V.A. Genome-wide association mapping of salinity tolerance in rice (Oryza sativa) / Kumar, V., A., Singh, S.V.A. Mithra, S. L. Krishnamurthy, S. K. Parida, S. Jain, K. K. Tiwari, P. Kumar, A. R. Rao, S. K. Sharma, J. P. Khurana, N. K. Singh, and T. Mohapatra // DNA Research: An International Journal for Rapid Publication of Reports on Genes and Genomes, 2015. - 22(2). - P. 133-145.</mixed-citation><mixed-citation xml:lang="en">Kumar, V.A. Genome-wide association mapping of salinity tolerance in rice (Oryza sativa) / Kumar, V., A., Singh, S.V.A. Mithra, S. L. Krishnamurthy, S. K. Parida, S. Jain, K. K. Tiwari, P. Kumar, A. R. Rao, S. K. Sharma, J. P. Khurana, N. K. Singh, and T. Mohapatra // DNA Research: An International Journal for Rapid Publication of Reports on Genes and Genomes, 2015. - 22(2). - P. 133-145.</mixed-citation></citation-alternatives></ref><ref id="cit11"><label>11</label><citation-alternatives><mixed-citation xml:lang="ru">Platten, J.D. Salinity tolerance, Na+ exclusion and allele mining of HKT1;5 in Oryza sativa and O. glaberrima: many sources, many genes, one mechanism? / J.D. Platten, J.A. Egdane, A.M. Ismail // BMC Plant Biol., 2013. - V. 13. - P 2-16.</mixed-citation><mixed-citation xml:lang="en">Platten, J.D. Salinity tolerance, Na+ exclusion and allele mining of HKT1;5 in Oryza sativa and O. glaberrima: many sources, many genes, one mechanism? / J.D. Platten, J.A. Egdane, A.M. Ismail // BMC Plant Biol., 2013. - V. 13. - P 2-16.</mixed-citation></citation-alternatives></ref><ref id="cit12"><label>12</label><citation-alternatives><mixed-citation xml:lang="ru">Boom, R. Rapid and simple method for purification of nucleic acids / R. Boom, C.J.A. Sol, M.M.M. Salimans, C.L. Jansen, P.M.E. Wertheim-Van Dillen, J. Van Der Noordaa // J. Clin. Microb., 1990. - V. 28. - № 3. - P. 495-503.</mixed-citation><mixed-citation xml:lang="en">Boom, R. Rapid and simple method for purification of nucleic acids / R. Boom, C.J.A. Sol, M.M.M. Salimans, C.L. Jansen, P.M.E. Wertheim-Van Dillen, J. Van Der Noordaa // J. Clin. Microb., 1990. - V. 28. - № 3. - P. 495-503.</mixed-citation></citation-alternatives></ref><ref id="cit13"><label>13</label><citation-alternatives><mixed-citation xml:lang="ru">Маркин, Н.В. Анализ полиморфизма хлоропластной ДНК культурного и дикорастущего подсолнечника Helianthus petiolaris / Н.В Маркин, К.В. Азарин, В.С. Лотник, О.Ф. Горбаченко., В.А. Гаврилова, А.В. Усатов // Масличные культуры: Науч.-техн. бюл. ВНИИМК, 2011. - №2 (148-149). - С. 105-108.</mixed-citation><mixed-citation xml:lang="en">Маркин, Н.В. Анализ полиморфизма хлоропластной ДНК культурного и дикорастущего подсолнечника Helianthus petiolaris / Н.В Маркин, К.В. Азарин, В.С. Лотник, О.Ф. Горбаченко., В.А. Гаврилова, А.В. Усатов // Масличные культуры: Науч.-техн. бюл. ВНИИМК, 2011. - №2 (148-149). - С. 105-108.</mixed-citation></citation-alternatives></ref><ref id="cit14"><label>14</label><citation-alternatives><mixed-citation xml:lang="ru">Mardani1, Z. Identification of molecular markers linked to salt-tolerant genes at germination stage of rice / Z. Mardani1, B. Rabiei, H. Sabouri, A. Sabouri // Plant Breeding, 2014. - V. 133. - P. 196-202.</mixed-citation><mixed-citation xml:lang="en">Mardani1, Z. Identification of molecular markers linked to salt-tolerant genes at germination stage of rice / Z. Mardani1, B. Rabiei, H. Sabouri, A. Sabouri // Plant Breeding, 2014. - V. 133. - P. 196-202.</mixed-citation></citation-alternatives></ref><ref id="cit15"><label>15</label><citation-alternatives><mixed-citation xml:lang="ru">Ali, Md.N. Screening of rice landraces for salinity tolerance at seedling stage through morphological and molecular markers / Md.N. Ali, L. Yeasmin, S. Gantait, R. Goswami, S. Chakraborty // Physiol Mol Biol Plants., 2014. - V. 20. - P. 411-423.</mixed-citation><mixed-citation xml:lang="en">Ali, Md.N. Screening of rice landraces for salinity tolerance at seedling stage through morphological and molecular markers / Md.N. Ali, L. Yeasmin, S. Gantait, R. Goswami, S. Chakraborty // Physiol Mol Biol Plants., 2014. - V. 20. - P. 411-423.</mixed-citation></citation-alternatives></ref></ref-list><fn-group><fn fn-type="conflict"><p>The authors declare that there are no conflicts of interest present.</p></fn></fn-group></back></article>
